[Gretl-devel] Re: MPI data transfer
On 18.10.2019 14:15, Allin Cottrell wrote:
On Fri, 18 Oct 2019, Marcin Błażejowski wrote:
> On 17.10.2019 21:41, Allin Cottrell wrote:
>> The matrix must have a single column, and a number of rows equal to
>> either $nobs or $tmax.
Allin, but it works on the yesterday's git gretl code. And if I run the
package in non-MPI environment on today's version, it works as well.
Here is a more verbose error:
----------
BACE 2.0, 2019-10-18 (Marcin Błażejowski, Jacek Kwiatkowski)
mpiexec exited with status 256stdout:
gretlmpi 2019d-git
Current session: 2019-10-18 15:41
Read datafile /home/marcin/.gretl/mpi-data.gdtb
Warning: 'Im' shadows a function of the same name
Warning: 'Im' shadows a function of the same name
Warning: 'Im' shadows a function of the same name
Warning: 'Im' shadows a function of the same name
Incompatible types in assignment: series = matrix
*** error in function BACE_initial_model, line 26
series YyY = M.Y_mat
called by function BACE_main
Incompatible types in assignment: series = matrix
*** error in function BACE_initial_model, line 26
series YyY = M.Y_mat
called by function BACE_main
Incompatible types in assignment: series = matrix
*** error in function BACE_initial_model, line 26
series YyY = M.Y_mat
called by function BACE_main
stderr:
gretlmpi: error executing script: halting
key_counts = BACE_main(&MODEL)
gretlmpi: error executing script: halting
key_counts = BACE_main(&MODEL)
gretlmpi: error executing script: halting
key_counts = BACE_main(&MODEL)
--------------------------------------------------------------------------
MPI_ABORT was invoked on rank 1 in communicator MPI_COMM_WORLD
with errorcode 1.
NOTE: invoking MPI_ABORT causes Open MPI to kill all MPI processes.
You may or may not see output from other processes, depending on
exactly when Open MPI kills them.
--------------------------------------------------------------------------
[marcin-note:23716] 2 more processes have sent help message
help-mpi-api.txt / mpi-abort
[marcin-note:23716] Set MCA parameter "orte_base_help_aggregate" to 0 to
see all help / error messages
*** error in function BACE_main_mpi, line 161
end mpi
called by function BACE_GUI
Error executing script: halting
BACEGUMFinal = BACE_GUI(d_p, y_lags, GUMBACE, with_const,
model_prior,
prior_avg_model_size, alpha, top_ranked_model, joint, forecasts, Nrep,
PercentOfburnin, MPI_threads, verbosity, progress)
----------
I tried gdb, but it says nothing. I have no idea what is going on, but
it must something to do with last changes in the gret's code.
Marcin
--
Marcin Błażejowski